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This work was supported in part by the grants SAF2017-88812-R and PID2020-119236RB-I00 by MICIU/AEI/10.13039/501100011033 and by "ERDF A way of making Europe" (from CM), PID2020-119386RB-I00 (from JA), PID2019-106447RB-I00 (from EP-N), PID2020- 113953RB-I00 (from EM), and PID2019-110356RB-I00 (from JF-I and ES). AG was supported by grants from MICIU/AEI/10.13039/501100011033 and by European Union NextGenerationEU/PRTR (grant CNS2022 - 135391, "Consolidacion" program), and by the Fundacion Ramon Areces (grant CIVP21A7024). JS-B was supported by a FPU grant from the Spanish Ministry of Science and Innovation (grant #FPU18/00194). PG-S was supported by a FPU grant from the Spanish Ministry of Science and Innovation (grant #FPU21/02928). GC-C was funded by a FI-2021 grant from the Agencia de Gestio d'Ajuts Universitaris i de Recerca (AGAUR) (grant #FI-B-00378). AC-G was supported by a Michael J. Fox Foundation grant (MJFF-000858). C.M, J.A., A.G., E.M and E.P-N, are also supported by AGAUR, Generalitat de Catalunya grant # 2021 SGR 01086. Also, the project has been supported by Maria de Maeztu Unit of Excellent, Institute of Neurosciences, University of Barcelona, MDM-2017-0729, Ministry of Science, Innovation, and Universities. Funding for open access charge: CIBERNED and Universitat de Barcelona.

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Guisado-Corcoll, AnnaAuthorMolina-Porcel, LauraAuthorAlberch, JordiAuthorMartí, EulàliaAuthorGiralt, AlbertAuthorPerez-Navarro, EstherAuthor

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Article

RTP801 interacts with the tRNA ligase complex and dysregulates its RNA ligase activity in Alzheimer's disease

Publicated to:Nucleic Acids Research. 52 (18): 11158-11176 - 2024-09-12 52(18), DOI: 10.1093/nar/gkae776

Authors: Campoy-Campos, Genis; Solana-Balaguer, Julia; Guisado-Corcoll, Anna; Chicote-Gonzalez, Almudena; Garcia-Segura, Pol; Perez-Sisques, Leticia; Torres, Adrian Gabriel; Canal, Merce; Molina-Porcel, Laura; Fernandez-Irigoyen, Joaquin; Santamaria, Enrique; de Pouplana, Lluis Ribas; Alberch, Jordi; Marti, Eulalia; Giralt, Albert; Perez-Navarro, Esther; Malagelada, Cristina

Affiliations

Barcelona Inst Sci & Technol BIST, Barcelona 08028, Catalonia, Spain - Author
Biobank Hosp Clin, Neurol Tissue Bank, FRCB IDIBAPS, Barcelona 08036, Catalonia, Spain - Author
Ctr Invest Biomed Red Enfermedades Neurodegenerat, Madrid 28029, Spain - Author
Inst Catalana Rec & Estudis Avancats ICREA, Barcelona 08010, Catalonia, Spain - Author
Inst Invest Biomed August Pi & Sunyer IDIBAPS, Barcelona 08036, Catalonia, Spain - Author
Inst Rec Biomed IRB Barcelona, Barcelona 08028, Catalonia, Spain - Author
Navarrabiomed, Dept Salud, Proteored ISCIII, Prote Unit, Pamplona 31008, Spain - Author
Univ Barcelona, Fac Med & Hlth Sci, Prod & Validat Ctr Adv Therapies Creatio, Barcelona 08036, Catalonia, Spain - Author
Univ Barcelona, Hosp Clin, Fdn Recerca Clin Barcelona Inst Invest Biomed Augu, Alzheimers Dis & Other Cognit Disorders Unit,Neuro, Barcelona 08036, Catalonia, Spain - Author
Univ Barcelona, Inst Neurociencies, Dept Biomed, Barcelona 08036, Catalonia, Spain - Author
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Abstract

RTP801/REDD1 is a stress-responsive protein overexpressed in neurodegenerative diseases such as Alzheimer's disease (AD) that contributes to cognitive deficits and neuroinflammation. Here, we found that RTP801 interacts with HSPC117, DDX1 and CGI-99, three members of the tRNA ligase complex (tRNA-LC), which ligates the excised exons of intron-containing tRNAs and the mRNA exons of the transcription factor XBP1 during the unfolded protein response (UPR). We also found that RTP801 modulates the mRNA ligase activity of the complex in vitro since RTP801 knockdown promoted XBP1 splicing and the expression of its transcriptional target, SEC24D. Conversely, RTP801 overexpression inhibited the splicing of XBP1. Similarly, in human AD postmortem hippocampal samples, where RTP801 is upregulated, we found that XBP1 splicing was dramatically decreased. In the 5xFAD mouse model of AD, silencing RTP801 expression in hippocampal neurons promoted Xbp1 splicing and prevented the accumulation of intron-containing pre-tRNAs. Finally, the tRNA-enriched fraction obtained from 5xFAD mice promoted abnormal dendritic arborization in cultured hippocampal neurons, and RTP801 silencing in the source neurons prevented this phenotype. Altogether, these results show that elevated RTP801 impairs RNA processing in vitro and in vivo in the context of AD and suggest that RTP801 inhibition could be a promising therapeutic approach. Graphical Abstract

Keywords

Alzheimer diseaseAnimalsArcheasDdit4 protein, humanDead-box rna helicasesDisease models, animalEif2-alphaExpressionHek293 cellsHippocampusHumansIdentificationMaleMiceNeuron deathNeuronsParkinsons-diseasePhosphorylationRna ligase (atp)Rna splicingRna, transferTranscription factorsTranslationUnfolded protein responseX-box binding protein 1Xbp1 messenger-rnaXbp1 protein, human

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Bibliometric impact. Analysis of the contribution and dissemination channel

The work has been published in the journal Nucleic Acids Research due to its progression and the good impact it has achieved in recent years, according to the agency WoS (JCR), it has become a reference in its field. In the year of publication of the work, 2024 there are still no calculated indicators, but in 2023, it was in position 6/313, thus managing to position itself as a Q1 (Primer Cuartil), in the category Biochemistry & Molecular Biology. Notably, the journal is positioned above the 90th percentile.

Independientemente del impacto esperado determinado por el canal de difusión, es importante destacar el impacto real observado de la propia aportación.

Según las diferentes agencias de indexación, el número de citas acumuladas por esta publicación hasta la fecha 2025-06-30:

  • Scopus: 1

Impact and social visibility

From the perspective of influence or social adoption, and based on metrics associated with mentions and interactions provided by agencies specializing in calculating the so-called "Alternative or Social Metrics," we can highlight as of 2025-06-30:

  • The use, from an academic perspective evidenced by the Altmetric agency indicator referring to aggregations made by the personal bibliographic manager Mendeley, gives us a total of: 14.
  • The use of this contribution in bookmarks, code forks, additions to favorite lists for recurrent reading, as well as general views, indicates that someone is using the publication as a basis for their current work. This may be a notable indicator of future more formal and academic citations. This claim is supported by the result of the "Capture" indicator, which yields a total of: 14 (PlumX).

With a more dissemination-oriented intent and targeting more general audiences, we can observe other more global scores such as:

  • The Total Score from Altmetric: 107.16.
  • The number of mentions on the social network X (formerly Twitter): 2 (Altmetric).
  • The number of mentions on Wikipedia: 1 (Altmetric).
  • The number of mentions in news outlets: 13 (Altmetric).

It is essential to present evidence supporting full alignment with institutional principles and guidelines on Open Science and the Conservation and Dissemination of Intellectual Heritage. A clear example of this is:

  • The work has been submitted to a journal whose editorial policy allows open Open Access publication.